{
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"NAMES": [
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}
}
},
"headers": [
["ES", "Expected synonymous sites"],
["EN", "Expected non-synonymous sites"],
["S", "Inferred synonymous substitutions"],
["N", "Inferred non-synonymous substitutions"],
["P[S]", "Expected proportion of synonymous sites"],
["dS", "Inferred synonymous susbsitution rate"],
["dN", "Inferred non-synonymous susbsitution rate"],
["dN-dS", "Scaled by the length of the tested branches"],
["P [dN/dS > 1]", "Binomial probability that S is no greater than the observed value, with Ps probability of success"],
["P [dN/dS < 1]", "Binomial probability that S is no less than the observed value, with Ps probability of success"],
["Total branch length", "The total length of branches contributing to inference at this site, and used to scale dN-dS"]
]
},
"analysis":{
"authors":"Sergei L Kosakovsky Pond and Simon DW Frost",
"citation":"Not So Different After All: A Comparison of Methods for Detecting Amino Acid Sites Under Selection (2005). _Mol Biol Evol_ 22 (5): 1208-1222",
"contact":"spond@temple.edu",
"info":"SLAC (Single Likelihood Ancestor Counting)\n uses a maximum likelihood ancestral state reconstruction\n and minimum path substitution counting to estimate site - level\n dS and dN,\n and applies a simple binomial - based test to test\n if dS differs drom dN.\n The estimates aggregate information over all branches,\n so the signal is derived from\n pervasive diversification or conservation. A subset of branches can be selected\n for testing as well.\n Multiple partitions within a NEXUS file are also supported\n for recombination - aware analysis.\n ",
"requirements":"in-frame codon alignment and a phylogenetic tree",
"version":"2.00"
},
"branch attributes":{
"0":{
"Node11":{
"Global MG94xREV":0.008883781246634116,
"Nucleotide GTR":0.008813294321639513,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
],
"codon": [
["ATG", "GGC", "TAT", "ATA", "AAC", "GTT", "TTC", "GCT", "TTT", "CCG", "TTT", "ACG", "---", "ATA", "TAT", "AGT", "CTA", "CTC", "TTG", "TGC", "AGA", "ATG", "AAT", "TCT", "CGT", "AAC", "TAT", "ATA", "GCA", "CAA", "GTA", "GAT", "GTA", "GTT", "AAC", "TTT", "AAT", "CTC", "ACA", "---"]
],
"nonsynonymous substitution count": [
[0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
],
"synonymous substitution count": [
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"Global MG94xREV":0.003443246312409445,
"Nucleotide GTR":0.003415926431626396,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
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"epi_isl_414480_USA_20200221_null_1":{
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"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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"epi_isl_414934_Shandong_20200121_null_1":{
"Global MG94xREV":0.008846520192066384,
"Nucleotide GTR":0.008776328908880778,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_414934_Shandong_20200121_null_1",
"synonymous substitution count": [
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]
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"epi_isl_414937_Shandong_20200126_null_1":{
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"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_414937_Shandong_20200126_null_1",
"synonymous substitution count": [
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"epi_isl_415435_Wales_20200306_null_1":{
"Global MG94xREV":0.3910026193098286,
"Nucleotide GTR":0.3879002722872218,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_415435_Wales_20200306_null_1",
"synonymous substitution count": [
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"epi_isl_416373_Shanghai_20200207_null_1":{
"Global MG94xREV":0.008887184764968603,
"Nucleotide GTR":0.008816670835308432,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_416373_Shanghai_20200207_null_1",
"synonymous substitution count": [
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]
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"epi_isl_416489_Wisconsin_20200315_null_1":{
"Global MG94xREV":0.008887139130338157,
"Nucleotide GTR":0.008816625562758579,
"amino-acid": [
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"codon": [
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"nonsynonymous substitution count": [
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"original name":"epi_isl_416489_Wisconsin_20200315_null_1",
"synonymous substitution count": [
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]
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"epi_isl_416567_unknown_20200215_null_1":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
["R", "W", "A", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
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"codon": [
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"original name":"epi_isl_416567_unknown_20200215_null_1",
"synonymous substitution count": [
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]
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"epi_isl_416604_unknown_20200216_null_1":{
"Global MG94xREV":0.01098011457898546,
"Nucleotide GTR":0.01089299463633106,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_416604_unknown_20200216_null_1",
"synonymous substitution count": [
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]
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"epi_isl_416677_Washington_20200312_null_1":{
"Global MG94xREV":0.008885096026603083,
"Nucleotide GTR":0.008814598669699539,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_416677_Washington_20200312_null_1",
"synonymous substitution count": [
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]
},
"epi_isl_417222_England_20200304_null_1":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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],
"original name":"epi_isl_417222_England_20200304_null_1",
"synonymous substitution count": [
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]
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"epi_isl_418113_Wales_20200313_null_1":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
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],
"codon": [
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"nonsynonymous substitution count": [
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"original name":"epi_isl_418113_Wales_20200313_null_1",
"synonymous substitution count": [
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]
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"epi_isl_418182_Madrid_20200312_null_3":{
"Global MG94xREV":0.03374221310086802,
"Nucleotide GTR":0.03347449097017129,
"amino-acid": [
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],
"codon": [
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"nonsynonymous substitution count": [
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],
"original name":"epi_isl_418182_Madrid_20200312_null_3",
"synonymous substitution count": [
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]
},
"epi_isl_418999_Singapore_20200301_null_4":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
["-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "K", "K", "KNTRSIM", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-"]
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"codon": [
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"nonsynonymous substitution count": [
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"original name":"epi_isl_418999_Singapore_20200301_null_4",
"synonymous substitution count": [
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]
},
"epi_isl_419835_Northern_Territory_20200224_null_17":{
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"Nucleotide GTR":0,
"amino-acid": [
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]
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"Global MG94xREV":0.008839477323767874,
"Nucleotide GTR":0.008769341921081331,
"amino-acid": [
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"original name":"epi_isl_421291_Wisconsin_20200323_null_2",
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]
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"Global MG94xREV":0.003423870334028043,
"Nucleotide GTR":0.003396704188810622,
"amino-acid": [
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]
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"epi_isl_421881_England_20200326_null_4":{
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"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_421881_England_20200326_null_4",
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]
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"epi_isl_421889_England_20200327_null_1":{
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"Nucleotide GTR":0,
"amino-acid": [
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"original name":"epi_isl_421889_England_20200327_null_1",
"synonymous substitution count": [
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]
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"epi_isl_422051_Wales_20200330_null_1":{
"Global MG94xREV":0.008887069866455427,
"Nucleotide GTR":0.00881655684843893,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_422051_Wales_20200330_null_1",
"synonymous substitution count": [
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]
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"epi_isl_422206_Wales_20200330_null_1":{
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"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_422206_Wales_20200330_null_1",
"synonymous substitution count": [
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]
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"epi_isl_422275_Wales_20200330_null_4":{
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"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_422275_Wales_20200330_null_4",
"synonymous substitution count": [
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]
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"epi_isl_422359_Wales_20200324_null_1":{
"Global MG94xREV":0.008889447632979388,
"Nucleotide GTR":0.008818915748959094,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_422359_Wales_20200324_null_1",
"synonymous substitution count": [
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]
},
"epi_isl_422425_Zhejiang_20200124_null_1":{
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"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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],
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"original name":"epi_isl_422425_Zhejiang_20200124_null_1",
"synonymous substitution count": [
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]
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"epi_isl_422581_Netherlands_20200330_null_1":{
"Global MG94xREV":0.008891569229391086,
"Nucleotide GTR":0.008821020511907309,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_422581_Netherlands_20200330_null_1",
"synonymous substitution count": [
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]
},
"epi_isl_422636_Prague_20200308_null_1":{
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"Nucleotide GTR":0,
"amino-acid": [
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],
"codon": [
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],
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],
"original name":"epi_isl_422636_Prague_20200308_null_1",
"synonymous substitution count": [
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"epi_isl_422725_Netherlands_20200323_null_8":{
"Global MG94xREV":0.008829742613196483,
"Nucleotide GTR":0.00875968444899598,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_422725_Netherlands_20200323_null_8",
"synonymous substitution count": [
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]
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"epi_isl_422985_Washington_20200317_null_1":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_422985_Washington_20200317_null_1",
"synonymous substitution count": [
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"epi_isl_423043_Bangkok_20200318_null_2":{
"Global MG94xREV":0.008886464032418136,
"Nucleotide GTR":0.008815955821293775,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_423043_Bangkok_20200318_null_2",
"synonymous substitution count": [
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"epi_isl_423187_England_20200329_null_6":{
"Global MG94xREV":0.008887797457611734,
"Nucleotide GTR":0.008817278666640912,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_423187_England_20200329_null_6",
"synonymous substitution count": [
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]
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"epi_isl_423309_England_20200325_null_1":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
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"original name":"epi_isl_423309_England_20200325_null_1",
"synonymous substitution count": [
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"epi_isl_423534_England_20200331_null_3":{
"Global MG94xREV":0.003449358107059185,
"Nucleotide GTR":0.003421989733230318,
"amino-acid": [
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"codon": [
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],
"original name":"epi_isl_423534_England_20200331_null_3",
"synonymous substitution count": [
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]
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"epi_isl_423536_England_20200331_null_1":{
"Global MG94xREV":0.008830878838326747,
"Nucleotide GTR":0.008760811658931788,
"amino-acid": [
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"codon": [
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"original name":"epi_isl_423536_England_20200331_null_1",
"synonymous substitution count": [
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]
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"epi_isl_423770_England_20200322_null_1":{
"Global MG94xREV":0.008835988418600669,
"Nucleotide GTR":0.008765880698067703,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "T", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
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"codon": [
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],
"original name":"epi_isl_423770_England_20200322_null_1",
"synonymous substitution count": [
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]
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"epi_isl_423807_England_20200324_null_2":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "Y"]
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"codon": [
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],
"nonsynonymous substitution count": [
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],
"original name":"epi_isl_423807_England_20200324_null_2",
"synonymous substitution count": [
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]
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"epi_isl_423904_England_20200318_null_1":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
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"codon": [
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],
"nonsynonymous substitution count": [
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"original name":"epi_isl_423904_England_20200318_null_1",
"synonymous substitution count": [
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]
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"epi_isl_424158_England_20200321_null_1":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
],
"codon": [
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],
"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424158_England_20200321_null_1",
"synonymous substitution count": [
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]
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"epi_isl_424288_Washington_20200322_null_3":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
["-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "V", "K", "L", "I", "L", "V", "V", "L", "S", "P", "C", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-"]
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"codon": [
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],
"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424288_Washington_20200322_null_3",
"synonymous substitution count": [
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]
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"epi_isl_424315_Idaho_20200320_null_1":{
"Global MG94xREV":0.3126408260279225,
"Nucleotide GTR":0.310160227975958,
"amino-acid": [
["-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "K", "EDAGV", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-"]
],
"codon": [
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],
"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424315_Idaho_20200320_null_1",
"synonymous substitution count": [
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]
},
"epi_isl_424334_Washington_20200324_null_5":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
["-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "L", "G", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-"]
],
"codon": [
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],
"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424334_Washington_20200324_null_5",
"synonymous substitution count": [
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]
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"epi_isl_424366_Kayseri_20200317_null_3":{
"Global MG94xREV":0.008885752904108648,
"Nucleotide GTR":0.008815250335316809,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
],
"codon": [
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],
"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424366_Kayseri_20200317_null_3",
"synonymous substitution count": [
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]
},
"epi_isl_424479_Reykjavik_20200320_null_1":{
"Global MG94xREV":1.02067650303481,
"Nucleotide GTR":1.012578110456716,
"amino-acid": [
["-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "Y", "G", "R", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-", "-"]
],
"codon": [
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"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424479_Reykjavik_20200320_null_1",
"synonymous substitution count": [
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]
},
"epi_isl_424600_Reykjavik_20200327_null_1":{
"Global MG94xREV":0.008828701249735288,
"Nucleotide GTR":0.008758651348064693,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "R", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
],
"codon": [
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"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424600_Reykjavik_20200327_null_1",
"synonymous substitution count": [
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]
},
"epi_isl_424993_Toulouse_20200301_null_7380":{
"Global MG94xREV":0,
"Nucleotide GTR":0,
"amino-acid": [
["M", "G", "Y", "I", "N", "V", "F", "A", "F", "P", "F", "T", "-", "I", "Y", "S", "L", "L", "L", "C", "R", "M", "N", "S", "R", "N", "Y", "I", "A", "Q", "V", "D", "V", "V", "N", "F", "N", "L", "T", "-"]
],
"codon": [
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"nonsynonymous substitution count": [
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],
"original name":"epi_isl_424993_Toulouse_20200301_null_7380",
"synonymous substitution count": [
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]
}
},
"attributes":{
"Global MG94xREV":{
"attribute type":"branch length",
"display order":1
},
"Nucleotide GTR":{
"attribute type":"branch length",
"display order":0
},
"amino-acid":{
"attribute type":"node label",
"display order":1
},
"codon":{
"attribute type":"node label",
"display order":0
},
"nonsynonymous substitution count":{
"attribute type":"branch label",
"display order":1
},
"original name":{
"attribute type":"node label",
"display order":-1
},
"synonymous substitution count":{
"attribute type":"branch label",
"display order":0
}
}
},
"data partitions":{
"0":{
"coverage": [
[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39]
],
"name":"slac.filter.default"
}
},
"fits":{
"Global MG94xREV":{
"AIC-c":1124.125231908707,
"Equilibrium frequencies": [
[0.03135186414067875],
[0.0228514205321631],
[0.01461662513692583],
[0.03694160252142373],
[0.01600406999496293],
[0.01166488002244685],
[0.00746129450969327],
[0.01885744304791967],
[0.01531755381432653],
[0.01116449925161089],
[0.007141232212352022],
[0.01804852757942316],
[0.0464631268238185],
[0.03386556045044528],
[0.02166168188359902],
[0.05474705922832072],
[0.01336971326262853],
[0.009744777496734476],
[0.006233124960964319],
[0.01575340563346603],
[0.006824788022415142],
[0.004974380484786759],
[0.003181800218162845],
[0.008041582640373595],
[0.006532029529839431],
[0.004760997720744681],
[0.003045312603824197],
[0.007696628100542237],
[0.01981377184247229],
[0.01444165586674631],
[0.009237424424604689],
[0.02334637840258715],
[0.01773087166619972],
[0.01292349325794742],
[0.008266350713082992],
[0.02089211698902646],
[0.009051012403737149],
[0.00659700774893522],
[0.004219693439007988],
[0.01066472159789396],
[0.008662757011936063],
[0.006314020198590014],
[0.004038683994278241],
[0.01020724397243737],
[0.02627696188101854],
[0.01915247857532258],
[0.01225064320988163],
[0.03096189358704507],
[0.01985503416051397],
[0.03209764482582768],
[0.01390554062098679],
[0.01013532576664088],
[0.006482934273740398],
[0.01638476589975695],
[0.009700557289809052],
[0.006204840059060891],
[0.01568191925451839],
[0.04037066181477706],
[0.0294249479441396],
[0.01882129967227612],
[0.04756836581060873]
],
"Log Likelihood":-483.8313234373467,
"Rate Distributions":{
"non-synonymous/synonymous rate ratio for *test*": [
[0.9097743975788892, 1]
]
},
"display order":1,
"estimated parameters":75
},
"Nucleotide GTR":{
"AIC-c":1177.021930429536,
"Equilibrium frequencies": [
[0.3009017560512577],
[0.1796392975794969],
[0.1585192216421452],
[0.3609397247271001]
],
"Log Likelihood":-489.7577376234733,
"Rate Distributions":{
"Substitution rate from nucleotide A to nucleotide C":0.4219511213197908,
"Substitution rate from nucleotide A to nucleotide G":1,
"Substitution rate from nucleotide A to nucleotide T":0.06928593531608203,
"Substitution rate from nucleotide C to nucleotide G":0.2213056737577337,
"Substitution rate from nucleotide C to nucleotide T":1.285258727214961,
"Substitution rate from nucleotide G to nucleotide T":0.6605853090670363
},
"display order":0,
"estimated parameters":97
}
},
"input":{
"file name":"/data/shares/veg/SARS-CoV-2/SARS-CoV-2/data/fasta/2020-04-14/sequences.ORF10.compressed.fas",
"number of sequences":46,
"number of sites":40,
"partition count":1,
"trees":{
"0":"(epi_isl_417222_England_20200304_null_1,epi_isl_422206_Wales_20200330_null_1,epi_isl_423309_England_20200325_null_1,(epi_isl_407073_England_20200129_null_1,epi_isl_414480_USA_20200221_null_1)Node86,(epi_isl_421562_Utah_20200319_null_1,epi_isl_424158_England_20200321_null_1)Node83,epi_isl_423043_Bangkok_20200318_null_2,epi_isl_423807_England_20200324_null_2,epi_isl_423536_England_20200331_null_1,epi_isl_424600_Reykjavik_20200327_null_1,epi_isl_416677_Washington_20200312_null_1,epi_isl_422581_Netherlands_20200330_null_1,epi_isl_422725_Netherlands_20200323_null_8,epi_isl_421889_England_20200327_null_1,((epi_isl_422636_Prague_20200308_null_1,epi_isl_422985_Washington_20200317_null_1)Node41,epi_isl_422275_Wales_20200330_null_4)Node40,epi_isl_423187_England_20200329_null_6,(epi_isl_423534_England_20200331_null_3,epi_isl_423904_England_20200318_null_1)Node80,epi_isl_423770_England_20200322_null_1,epi_isl_416373_Shanghai_20200207_null_1,epi_isl_416489_Wisconsin_20200315_null_1,epi_isl_413602_Helsinki_20200303_null_1,epi_isl_421291_Wisconsin_20200323_null_2,((epi_isl_414937_Shandong_20200126_null_1,((epi_isl_415435_Wales_20200306_null_1,epi_isl_424288_Washington_20200322_null_3)Node63,epi_isl_424334_Washington_20200324_null_5)Node62,((epi_isl_422425_Zhejiang_20200124_null_1,epi_isl_424315_Idaho_20200320_null_1)Node68,epi_isl_418999_Singapore_20200301_null_4)Node67)Node60,epi_isl_421881_England_20200326_null_4)Node59,epi_isl_422359_Wales_20200324_null_1,(epi_isl_413860_Guangdong_20200130_null_1,epi_isl_418113_Wales_20200313_null_1)Node24,epi_isl_424993_Toulouse_20200301_null_7380,epi_isl_414934_Shandong_20200121_null_1,epi_isl_424366_Kayseri_20200317_null_3,(epi_isl_419835_Northern_Territory_20200224_null_17,(epi_isl_418182_Madrid_20200312_null_3,epi_isl_416567_unknown_20200215_null_1,epi_isl_424479_Reykjavik_20200320_null_1)Node13,epi_isl_416604_unknown_20200216_null_1)Node11,epi_isl_422051_Wales_20200330_null_1)"
}
},
"tested":{
"0":{
"Node11":"test",
"Node13":"test",
"Node24":"test",
"Node40":"test",
"Node41":"test",
"Node59":"test",
"Node60":"test",
"Node62":"test",
"Node63":"test",
"Node67":"test",
"Node68":"test",
"Node80":"test",
"Node83":"test",
"Node86":"test",
"epi_isl_407073_England_20200129_null_1":"test",
"epi_isl_413602_Helsinki_20200303_null_1":"test",
"epi_isl_413860_Guangdong_20200130_null_1":"test",
"epi_isl_414480_USA_20200221_null_1":"test",
"epi_isl_414934_Shandong_20200121_null_1":"test",
"epi_isl_414937_Shandong_20200126_null_1":"test",
"epi_isl_415435_Wales_20200306_null_1":"test",
"epi_isl_416373_Shanghai_20200207_null_1":"test",
"epi_isl_416489_Wisconsin_20200315_null_1":"test",
"epi_isl_416567_unknown_20200215_null_1":"test",
"epi_isl_416604_unknown_20200216_null_1":"test",
"epi_isl_416677_Washington_20200312_null_1":"test",
"epi_isl_417222_England_20200304_null_1":"test",
"epi_isl_418113_Wales_20200313_null_1":"test",
"epi_isl_418182_Madrid_20200312_null_3":"test",
"epi_isl_418999_Singapore_20200301_null_4":"test",
"epi_isl_419835_Northern_Territory_20200224_null_17":"test",
"epi_isl_421291_Wisconsin_20200323_null_2":"test",
"epi_isl_421562_Utah_20200319_null_1":"test",
"epi_isl_421881_England_20200326_null_4":"test",
"epi_isl_421889_England_20200327_null_1":"test",
"epi_isl_422051_Wales_20200330_null_1":"test",
"epi_isl_422206_Wales_20200330_null_1":"test",
"epi_isl_422275_Wales_20200330_null_4":"test",
"epi_isl_422359_Wales_20200324_null_1":"test",
"epi_isl_422425_Zhejiang_20200124_null_1":"test",
"epi_isl_422581_Netherlands_20200330_null_1":"test",
"epi_isl_422636_Prague_20200308_null_1":"test",
"epi_isl_422725_Netherlands_20200323_null_8":"test",
"epi_isl_422985_Washington_20200317_null_1":"test",
"epi_isl_423043_Bangkok_20200318_null_2":"test",
"epi_isl_423187_England_20200329_null_6":"test",
"epi_isl_423309_England_20200325_null_1":"test",
"epi_isl_423534_England_20200331_null_3":"test",
"epi_isl_423536_England_20200331_null_1":"test",
"epi_isl_423770_England_20200322_null_1":"test",
"epi_isl_423807_England_20200324_null_2":"test",
"epi_isl_423904_England_20200318_null_1":"test",
"epi_isl_424158_England_20200321_null_1":"test",
"epi_isl_424288_Washington_20200322_null_3":"test",
"epi_isl_424315_Idaho_20200320_null_1":"test",
"epi_isl_424334_Washington_20200324_null_5":"test",
"epi_isl_424366_Kayseri_20200317_null_3":"test",
"epi_isl_424479_Reykjavik_20200320_null_1":"test",
"epi_isl_424600_Reykjavik_20200327_null_1":"test",
"epi_isl_424993_Toulouse_20200301_null_7380":"test"
}
},
"timers":{
"Model fitting":{
"order":1,
"timer":1
},
"Primary SLAC analysis":{
"order":2,
"timer":0
},
"Total time":{
"order":0,
"timer":1
}
}
}